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Categorization of antimicrobials based on importance in human medicine | Antimicrobial | SPECIES | bspecies | project | E. faecalis (n = 426) | E. faecium (n = 8) | Enterococcus spp. (n = 25) | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N | ATM | P | LCL | UCL | EBMINUS | EBPLUS | N | ATM | P | LCL | UCL | EBMINUS | EBPLUS | N | ATM | P | LCL | UCL | EBMINUS | EBPLUS | |||||
IV | |||||||||||||||||||||||||
III | Tetracycline | Chicken | Enterococcus | Pilote Detail | 426 | TET | 0.8450704 | 0.8071543 | 0.878106159 | 0.037916074 | 0.033035736 | 8 | TET | 0.75 | 0.349144206 | 0.968145974 | 0.400855794 | 0.218145974 | 25 | TET | 0.56 | 0.349282 | 0.755976 | 0.210718 | 0.195976 |
Nitrofurantoin | 426 | NIT | 0.0046948 | 0.0005691 | 0.016855679 | 0.004125763 | 0.012160844 | NIT | 0.625 | 0.244863216 | 0.914766586 | 0.380136784 | 0.289766586 | NIT | 0.4 | 0.211255 | 0.613347 | 0.188745 | 0.213347 | ||||||
Chloramphenicol | 426 | CHL | 0.0164319 | 0.0066314 | 0.033561695 | 0.009800569 | 0.017129771 | CHL | 0 | 0 | 0.312343978 | 0 | 0.312343978 | CHL | 0 | 0 | 0.112928 | 0 | 0.112928 | ||||||
II | Tylosin | 426 | TYL | 0.5657277 | 0.5171664 | 0.61336992 | 0.048561346 | 0.047642221 | TYL | 0.5 | 0.15701277 | 0.84298723 | 0.34298723 | 0.34298723 | TYL | 0.24 | 0.093564 | 0.451288 | 0.146436 | 0.211288 | |||||
Streptomycin | 426 | STR | 0.286385 | 0.2438955 | 0.331870507 | 0.042489461 | 0.045485531 | STR | 0.75 | 0.349144206 | 0.968145974 | 0.400855794 | 0.218145974 | STR | 0.24 | 0.093564 | 0.451288 | 0.146436 | 0.211288 | ||||||
Quinupristin-dalfopristina | 0 | QDA | 0 | 0 | 0 | 0 | 0 | QDA | 0.875 | 0.473490329 | 0.996840276 | 0.401509671 | 0.121840276 | QDA | 0.44 | 0.244024 | 0.650718 | 0.195976 | 0.210718 | ||||||
Penicillin | 426 | PEN | 0 | 0 | 0.007007567 | 0 | 0.007007567 | PEN | 0.625 | 0.244863216 | 0.914766586 | 0.380136784 | 0.289766586 | PEN | 0.12 | 0.025465 | 0.31219 | 0.094535 | 0.19219 | ||||||
Lincomycina | 0 | LIN | 0 | 0 | 0 | 0 | 0 | LIN | 1 | 0.687656022 | 1 | 0.312343978 | 0 | LIN | 0.96 | 0.796483 | 0.998988 | 0.163517 | 0.038988 | ||||||
Kanamycin | 426 | KAN | 0.2159624 | 0.1778027 | 0.258119254 | 0.038159789 | 0.042156813 | KAN | 0.25 | 0.031854026 | 0.650855794 | 0.218145974 | 0.400855794 | KAN | 0.24 | 0.093564 | 0.451288 | 0.146436 | 0.211288 | ||||||
Gentamicin | 426 | GEN | 0.0680751 | 0.0460616 | 0.096306259 | 0.022013493 | 0.028231142 | GEN | 0 | 0 | 0.312343978 | 0 | 0.312343978 | GEN | 0.04 | 0.001012 | 0.203517 | 0.038988 | 0.163517 | ||||||
Erythromycin | 426 | ERY | 0.5657277 | 0.5171664 | 0.61336992 | 0.048561346 | 0.047642221 | ERY | 0.5 | 0.15701277 | 0.84298723 | 0.34298723 | 0.34298723 | ERY | 0.24 | 0.093564 | 0.451288 | 0.146436 | 0.211288 | ||||||
I | Vancomycin | 426 | VAN | 0 | 0 | 0.007007567 | 0 | 0.007007567 | VAN | 0 | 0 | 0.312343978 | 0 | 0.312343978 | VAN | 0 | 0 | 0.112928 | 0 | 0.112928 | |||||
Tigecycline | 426 | TIG | 0 | 0 | 0.007007567 | 0 | 0.007007567 | TIG | 0 | 0 | 0.312343978 | 0 | 0.312343978 | TIG | 0 | 0 | 0.112928 | 0 | 0.112928 | ||||||
Linezolid | 426 | LNZ | 0 | 0 | 0.007007567 | 0 | 0.007007567 | LNZ | 0 | 0 | 0.312343978 | 0 | 0.312343978 | LNZ | 0 | 0 | 0.112928 | 0 | 0.112928 | ||||||
Daptomycin | 426 | DAP | 0 | 0 | 0.007007567 | 0 | 0.007007567 | DAP | 0 | 0 | 0.312343978 | 0 | 0.312343978 | DAP | 0 | 0 | 0.112928 | 0 | 0.112928 | ||||||
Ciprofloxacin | 426 | CIP | 0.0117371 | 0.0038217 | 0.027176625 | 0.007915406 | 0.015439536 | CIP | 0.625 | 0.244863216 | 0.914766586 | 0.380136784 | 0.289766586 | CIP | 0.08 | 0.00984 | 0.260306 | 0.07016 | 0.180306 |
a Resistance to quinupristin-dalfopristin and lincomycin is not reported for E. faecalis because E. faecalis is intrinsically resistant to these antimicrobials.